Category:Computational phylogenetics

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Computational phylogenetics is the study of computational algorithms, methods and programs for use in phylogenetic analyses.

The main article for this category is Computational phylogenetics.

Pages in category "Computational phylogenetics"

The following 43 pages are in this category, out of 43 total. Updates to this list can occasionally be delayed for a few days.

A

  • ARB Project
  • Align-m

B

  • BLAST
  • BLOSUM
  • Bayesian inference in phylogeny

C

  • Clustal
  • Computational phylogenetics
  • Conserved sequence
  • Covarion

D

  • DIALIGN-T
  • DIALIGN-TX
  • Dendroscope
  • Disk-covering method
  • Distance matrices in phylogeny

F

  • FASTA
  • Joseph Felsenstein

G

  • Gap penalty
  • Generalized tree alignment

I

  • Informative site

J

  • JAligner
  • Jalview

L

  • Least squares inference in phylogeny
  • List of phylogenetics software

M

  • MAFFT
  • MEGAN
  • MUSCLE
  • Maximum parsimony
  • Models of DNA evolution
  • Multiple sequence alignment

N

  • Needleman-Wunsch algorithm
  • Neighbor-joining

P

  • PHYLIP
  • Perfect phylogeny
  • ProbCons

S

  • Sequence alignment
  • Similarity matrix
  • Smith-Waterman algorithm
  • SplitsTree
  • Substitution model

T

  • T-Coffee
  • Tree alignment

U

  • UPGMA

Y

  • Yass (software)
Categories: Phylogenetics
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